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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375641, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATWCKTILV SCILSMIMLN LSYADEDLPV HEFKVGVLAN HGVLQAKQRW QPMMDYLSEN  60
   61 VPNSRFEVVP LDFDGMRSQL LSNELQFIVT NPGQYLHLSN NFPLSWLATM KSRKHQGSTF 120
  121 TIGATIIVRA DSPIRSLQDL RGKNVVASDP QALGGYQAAM GLLHKMGYLP EQFFGQVRFL 180
  181 GFPLAPLIYQ VRDGSADAAI APFCTLEEMI ETGLINKADY RVIHPTNPPG YDCEVSTQLY 240
  241 PNWSFAAADT VSPWITMQIT RALFDLPADH VAAITADTLG WTAPVSQLKV IELFKELQLQ 300
  301 GASPPLYQTV YKWMEKNKEW GGVLLLIFIV STIYHLWLEY KFRQKSEFLV STERQLKDKA 360
  361 LQLERLQSAA ILGEIGAGLA HELNQPIAAI TQYSEGAMIQ LERLGHDNPE LYDILGKINA 420
  421 QSIRAGAVVH RIRGLLKRRQ AKAESLNVTL VVKEALALLR RELDRAGVQV TVEVEGHPYE 480
  481 LMGDNVGLSQ MWVNLVKNSL DALEACKDNR SRQLRIEIYY LPNEIKVLVI DNGEGLQGQA 540
  541 SELMASFAST KDTGLGLGLA ICKDVVSRHH GSIEIENCKQ STQTPLPWQQ GCVVTVILPR 600
  601 G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle