YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375598, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLKHFGLGQ APFSLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIC  60
   61 RKLINELPQG FHCAYLPNPY LTPAELRWAV ANELGLKYTS EIDQQQLTGL IQQQLLALST 120
  121 HGHAIVLVLD EAQALPDESL EALRLFTNLE TESRKLLQVV LFGQPELDER LKRQAFRQLR 180
  181 QRITFSYNLR PLTWDETDAY IRYRLAVAGH AGQALFSPKI TRKIAQASRG IPRLINILAH 240
  241 KALMLSFGEG ATQVRMSHLK GAICDTEDAS PTRVQKWSTY FAIAFMVFAV AMLALLLSGT 300
  301 NFLQWWGDGA

Type	Start	End	Confidence
Cytoplasmic	1	278	0.76
Transmembrane Helix	279	300	0.91
Non-Cytoplasmic	301	310	0.69