YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375592, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRQQGFTLI ELVVVIIILG ILAVTAAPKF INLQGDARAS ALQGLKGAIQ GANSLVFSKA  60
   61 ALAGKEKGSQ PTFSLGDTGT IAILDGYMLA TKASLEAGMD ITFDAKADPQ PVTADWIIDP 120
  121 TAGTPGTAKI YQHGAPANCF LTYTEAKAAN TSTNPATPGE LPKYVITDSG C

Type	Start	End	Confidence
Cytoplasmic	1	6	0.49
Transmembrane Helix	7	27	0.51
Non-Cytoplasmic	28	171	0.89