YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375591, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQAGFTLV ELVTTIILIG ILSVTVLPRL FSQSSYSAFS LRNEFMAELR QVQQKALNNT  60
   61 DRCFRVAVST TGYQVSQFAS RNSAGCTGAA LAPNPLYTQA FQGGAQLVLT GNSANSFNLD 120
  121 FDINGRPSLA CNGSCIKVIA NDTLVINISS EGYIYAN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.80
Transmembrane Helix	7	31	0.79
Non-Cytoplasmic	32	157	0.89