YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375590, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRINPRLFSM KTSIDTSPNA AQNTIRQQGF TLIELVVGML VIAIAIVMLS SMLFPQADRA  60
   61 AKTLHRVKSA ELAHSVMNEV WGKRYDQNTN ANGGVPACGS PLGSSCSATL GPEAGEGRND 120
  121 FNDVDDYHGL SQNDAMLNSS QTYAEAYPNY QLSVTVTYGA APNTKLVTIN VTTPDNEVIT 180
  181 YNLVRSNY

Type	Start	End	Confidence
Cytoplasmic	1	29	0.54
Transmembrane Helix	30	54	0.84
Non-Cytoplasmic	55	188	0.55