YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375583, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQAANGRI VVWLTLFVGL LSQIMPLPTI VEAWRPDWLL MILIYWSIAL PHRYNILTAW  60
   61 VMGLALDILL GATLGVRSLA MSLVIYIAIL HCQRLRNFPK WQQSLVVMLL IAIYHLIVYW 120
  121 VEFVMDGATF HAELFLPALS GLVFWPWIFW ILRRIRRHYK VR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.74
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	63	0.68
Transmembrane Helix	64	90	0.77
Cytoplasmic	91	100	0.89
Transmembrane Helix	101	121	0.89
Non-Cytoplasmic	122	129	0.80
Transmembrane Helix	130	152	0.89
Cytoplasmic	153	162	0.97