YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375361, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNILGVAV ILALSQSIIS SESNAAGFKP APPAGQLGAI LVNPYGNSPL TAILELSSKK  60
   61 PTNVTVTVHG KGNNGVDISY PVGQRTMNTH DGIPLFGLYA DHNNQVTVKY TLDGKNLTEK 120
  121 YNVLTGAISN KYVDNRSTTV MQEVKVKTVA KGFENRLYMV NSHTYNQQGS DIHWSGQKGK 180
  181 DAGIFESTPS MGSLTFDNAP MTYVVDTKGE IRWWLEQDAV YDGSDVDLNK RGYFMGLHDN 240
  241 GKGGITFVQG QRYGHFDLLG NVESRRLPRG YIDASHEHNL MPNGHSLIRA AKSNYENDRG 300
  301 DVVHTVRDHI LEIDQQGNLV DVWNLATILD PYRDALLNAL DMGAVCLNVD MDNIGKTAEV 360
  361 KIDAPYGDIP GVVAGRNWAH INSVEYDPKD DSIILSFRHQ GVAKVTRDKK VKWILAPSEG 420
  421 WNKELSTKLL TPVDSKGKKI SCTSKGVCDG DFDFTYTQHT AWLNNKTGTL TVLDNGDGRG 480
  481 YEQPALPTMK YSRFVEYKIN EENMTVEQIW EYGKERGYEW YSPITSNVEY MEDKDTMFGF 540
  541 GGSVDLYNPG KPTIGRINEI GYDDKKVKVE IDVLSDKPNS PHYRAIILNP SSQFGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle