YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375277, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSALGLSA PLQKAVSEQG YDTPSPIQAQ AIPAVLTGKD VMAAAQTGTG KTAGFTLPLL  60
   61 ELLAKGHKAK SGQTRALVLT PTRELAAQVG ESVETYGKYL PLRSAVVFGG VPINPQINKL 120
  121 RHGVDVLVAT PGRLLDLVQQ NAVKFNQLEI LVLDEADRML DMGFIRDIKK ILALLPAKRQ 180
  181 NLMFSATFSD EIRELAKGLV NHPVEISVTP RNAAATTVKQ WICPVDKTQK SALLIQLIKQ 240
  241 ENWQQVLVFS RTKHGANRLA KSLIQAEISA AAIHGNKSQG ARTKALADFK SGEVRVLVAT 300
  301 DIAARGLDID QLPQVVNFDL PNVPEDYVHR IGRTGRAGAT GQAVSLVSSE EIKLLKDIER 360
  361 LINRVLERQE VEGFSPVHAL PETTLNPQGK DTKVKAVANH RKHRSAGKPA PRSGSGRDTQ 420
  421 GNRENSQRQN SASSRNSNEH NNTEAAVARS PKPKSKHPQR DGGTANSATA GNNAKAKPHS 480
  481 GAQQRSHAER SEKSNNDGRR QEQPKGRNPQ SAKPASNQPK QHSHRADNRP NSVKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle