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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375167, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPLVIAV AMALSSTALS FALAAEEGVK PTAVQKSAEQ GVVETEFDEV LVSATRLSEK  60
   61 VSETSRSVAV VAEEQLNVSQ ASSVAEVLKN EANINLTNGP RATSQGVEIR GLSGDRVLQT 120
  121 IDGARQNTSS GHRGSYFMDP ELLKSIEVIR GPASSLWGSG ALGGVVAQNT KSAQDFLAPN 180
  181 ETFGGYLKQG YDTNGDRTKT SGAVYGQQAT VDWLLNGSYF DSNNINTGND ETLVNSASSG 240
  241 SSGLAKFGWQ ADEASRLALS ARVNKINELV PSNPSAAVSS SVPLVRRKTD DQNITLNYSL 300
  301 APANNPYLDT HLQVYWNSTD YDEDRVTKGQ LDSTEYRTVG INLNNSSQLG NTKLTYGVDG 360
  361 YRDTLKTVRD DKGQVGQRPE DIDGETTVWG AFTRADVQLT QTVNLDAALR YDSFKNQSHN 420
  421 LNASADDTEL SPSLGLSWQT QPWLTLSARY DQAFRAPTVE EMFSSGTHYC IPPIPGFLPK 480
  481 GLCNTFATNP NLKSEVARNK ELKADFRFNE LAGDDELAIT LNIFRNDVDD FIVQQVSNPY 540
  541 RGIPGLEQTT SWNNVEDAQL TGFELSGRYR IGQTRLAMNY GQTRGEDRNT GDYIEGMPAN 600
  601 KFNVDLSQGI MEGDMKLGTR VTYVASQTNT PTGYSVAKYD EYTLWDVYLA WEPAMGVMSG 660
  661 LRVDFAIENI GDEKYQQAWQ TLYQPGRNMK LSARYMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle