YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375158, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTITLISLI ILALLVGAIG LLMWQRSKGK PIPLAVIVVL GCFALGLGGI IGFVHKGEDY  60
   61 QAYQKLQWHT LAPEKIAPLV AQGYTVFVDI TSDWCSICQT NKAEVTHREQ VVNALMADDI 120
  121 ILMQGNWSEA DNTIAGYMQY EGIPGTPYNK IYGPRNPNGI VLPSKLTIEA VINGLAQAKA 180
  181 L

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.65
Transmembrane Helix	5	24	0.94
Cytoplasmic	25	31	0.63
Transmembrane Helix	32	55	0.90
Non-Cytoplasmic	56	181	0.67