YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375154, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRDRLQGSS PQSAGFTLIE LVVVIIVLGV LAVVALPKFI NVQQDAQIAT VKAAGAGFKS  60
   61 GLNLARSVWA VKVGSGPKED LPVFGTAQSE QVDFNANGWP VQHYIYGNEA SPSLDNVEDC 120
  121 VSVWEVLFQN SQPSVSRLNI DATETDYKAS YISPNQCRYF YRANDKLSIY YDSRTGTVTT 180
  181 DLDPNS

Type	Start	End	Confidence
Cytoplasmic	1	15	0.82
Transmembrane Helix	16	36	0.93
Non-Cytoplasmic	37	186	0.87