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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LPTD_SHEON
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIRYLLALS LLPKLVLADE SPATSASQCL IEPPVPRIVS QPGLSAADQA KIRIASDRSK  60
   61 AEMGKQAIFT GDVVFSQGDR HIAADEAILD QATEQFDANG NLVFQDSNFT VTADSLQAQM 120
  121 RSNRATLTGA QYWLHGQQVH GDAEKLQITI NNNLILTNTN FTTCPPDNVS WLLEAEKIKI 180
  181 NSEEEWGEIW NAKLRVADIP VFYIPYMTVP VSDKRKTGFL YPSFSTSTTN GFEVSAPYYW 240
  241 NIAPEYDLTF TPNYMTNRGL FTKTEFRYLA GEAQNGRLNL EYLGSDQMLN GSPNRYLYNW 300
  301 QHQGAIDKNW RVLANFTEVS DNNYFNDLKS DVNRATDNQL SRIGEVSYFE RDWDISTRVQ 360
  361 DIKVLGEDEK PYQVMPQVNF NYRAADFWNN LDFGFNSELT NFAHQDDDVN TATRLHMAPS 420
  421 LTLPIHGPSG SFTSQLKLMQ TNYWQEKNNS KFDSLDDTVS RTIPQVRING QINFERFTEL 480
  481 FEHNYRQTLE PQFQYLYVGY EDQRGIGIYD TAQLQDDYFG LFRDRRFSGL DRIADANQVT 540
  541 LGITTRLFDD HNQEATKFSL GQIFYLQDSK LGYEDNIFEQ NQSTSVLAAE LDTRLSSNWY 600
  601 LGAAIQYDTN TSDNKKTEVT LDFRPEANKL LQFSYRYVPD LLNSNTNDLV NISQAGVRGA 660
  661 WPINDSLYFV GNWYYDLNET RSIETYTGVQ YESCCYAIRL SYHYRIKTNY DDNIGSTIID 720
  721 EREQFESGVY LNLIIKGLGG SGPLGVSDML NDGLFNYRKP LYLRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle