YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24349861, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVKLTKALL GTLLLGASLN VAAADQTLLN SSYDISRELF NAYNPVFAKH WQEKTGKTVE  60
   61 IKQSHAGSSA QARSILQGLP ADVVTFNQVT DVQILHDRGK LIPENWQQLL PNASSPYYST 120
  121 IAFLVRKGNP KQISDWGDLA KDDVKLVFPN PKTSGNARYT YLAALGFAQK NYGKDNEASL 180
  181 DAFLKKFLGN VAVFDTGGRG ATTSFVERGI GDVLITFESE VNNIRQQYGA DGYQVVVPKT 240
  241 SILAEFPVAV VEKNAKRNGT QELATEYLSY LYSEESQRLL AGFNYRVHNE KVIAEFTKQF 300
  301 PTVELMTVEQ IIGNWDNAMK TQFANGAKLD QLLKR

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	335	0.99