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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374963, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKYSLRSWV LVLALAPTIL VGILLGSYFT INRFYELEDT LIEQGSNIIE PLAIASEVGL  60
   61 VGNDREATKR LLAAAQLNKS TLVKSIAIFD IHNQLFVTSH YHKDFEIMRY KEALTNLQKT 120
  121 EIEHVGDSLI LRTPIFATAT PTGSEPANVD IQTDNGELLG YISVIINKER ALLEQHRAAV 180
  181 AAFIIVLIGV QLNLLFTFRL VKNVTQPITE MVRVVAKIRE GKLDARLQGN LIGELDLLKR 240
  241 GINAMAGSLS EYHDEMQQNI DQATSDLRET LEQIEIQNVE LDLAKKRALE ASRIKSEFLA 300
  301 NMSHELRTPL NGVIGFARQL VKTPLHSSQV DYINTIERSA TNLLAIINDI LDFSKLEAGK 360
  361 MVLESMPFGL RETLGETITL ISGSAQAKGL ELVVDIAPNV PDNVNGDSMR VCQIINNLVG 420
  421 NAIKFTDSGS VLVKLELQAQ TDEQVVLRCD VIDTGIGIDE SQQDFLFQAF GQADSSISRR 480
  481 FGGTGLGLVI TKRLVNQMGG QIGFTSSVDK GSNFWFTLPL GLGQFQIGDS LPLEKLQNKT 540
  541 VLFYEPRVLT HSVISRQLKQ WDTKVTHHQH IPSLQTTLST TEHQFDYVLL SCHGFNNPNH 600
  601 LVSTLIQAKA KTDCLIVLFD CQEQDMLSQF IRPNADVVLS LPVSEHQLAR NMLYPPMEYD 660
  661 LLPPVSIAVP AARQSLTVLA VDDNFANLKL IDTLLNELVT TVIAVNSGEE AVKQAKTRTF 720
  721 DLIFMDIQMP GTDGISATKQ IRQGSMNRNT PIIAVTAHAI AEERELILGS GMDGYLPKPI 780
  781 DEAALKAEIN RWITRPKFTH FDLHTLNWDL CLTQANHKSG LALDMLRMLL DSLPQTVSAI 840
  841 EAALSQNDQV TMLSTIHKLH GASCYCGVPT TQRLCQEIES ALKREARVED LEPEILELLD 900
  901 ELTKVESAAK QVLSQLSAEI TDDQKNGLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle