YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24374685, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIRLIDFLA AFFGLLLLWP ILLIVTIIGL FDTGSPIFIQ TRVGKHKKPF NLVKFRTMSK  60
   61 DTASVASHLA SNAAITKFGG FLRKTKIDEL PQLINVLKGE MSLVGPRPNL FNQEELIAER 120
  121 DALGVYNVLP GVTGLAQVQN IDMSTPKLLA QTDKQMIDTL TLRSYFKYIL MTATGSGSGD 180
  181 AVKPS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.83
Transmembrane Helix	8	31	0.88
Non-Cytoplasmic	32	185	0.86