YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24374651, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLNQQMGIT RPLKTVAKML ALASVFATSF NVFAAPVEIK FSHVVAENTP KGQMALKFKE  60
   61 LVEQRLPGEY TVSVFPNSQL FGDNNELAAL LLNDVQFVAP SLSKFERYTK RLQVFDLPFL 120
  121 FNDMDAVNRF QQGEAGQALL NSMSRKGIVG LGYLHNGMKQ FTANTPLKQP SDAKGLKFRV 180
  181 MASDVLAAQF DAVGAIPVKK PFSEVFTLLQ TRAIDGQENT WSNTYSQKFY EVQSHITESN 240
  241 HGVLDYMVVT SDAFWKSLPA DKRKVIKEAL DESIALGNKI AAEKDNEDKQ LILDSKLSQL 300
  301 VTLSPAERQQ WVDVMKPVWS KFEDQVGKDV IEAAVAANK

Type	Start	End	Confidence
Signal Peptide	1	34	0.98
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	339	0.99