YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24374596, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSSTTTLV DAVASPQAQQ AVYIGLVNPK TPTNVGGIMR ASGCYGVDAV FYTGKRYEYA  60
   61 ARGPQQYNAD TQSAAERIPL TGVTSLLDAI PAGTQLVCVD LVLGATPLPE FVHPERAFYV 120
  121 FGPEDGTIGQ EIIDRADAVV YVPTVGCMNL AASVNVLLYD RLAKTYRKQA TNEAEFDGDA 180
  181 LIRTSRDNNN RTRVKTTKRE SSK

Type	Start	End	Confidence
Signal Peptide	1	20	0.74
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	203	0.98