YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24349197, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWIDYAIIF VIGLSTLISL IRGFAKEAMS LVVWFAAFFV ASQFYQDLAI HLTQMNDEML  60
   61 RNGVSIAILF ITTLILGALI NYIIGQLVVK TGLSGTDRLL GLCFGAIRGA LIVSALLFFM 120
  121 DAFTGSPNAQ WWKDSVLVPE FGVVIQWFFN YLENTSSFVP KL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.80
Transmembrane Helix	6	24	0.90
Cytoplasmic	25	30	0.74
Transmembrane Helix	31	50	0.88
Non-Cytoplasmic	51	63	0.80
Transmembrane Helix	64	85	0.92
Cytoplasmic	86	98	0.80
Transmembrane Helix	99	122	0.87
Non-Cytoplasmic	123	162	0.61