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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374443, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRNIMLIPI GTGVGLTSLS LGMVRALERH GVKVQFFKPI SQLRPNDNGP ERSTTILSKS  60
   61 PTVNPLEPFD MAHAEALIRA DQTDVLMEQI IARAAECASN TETLIVEGLV PTRNHPFADD 120
  121 VNYAIAKAMD ADVIFIATPG SDTPTGLMNR LEIAYNSWGG KNNKRLIGAV INKIGAPVDD 180
  181 EGRARPDLSE VFDHQGVQRS DASIMFQLPG KSPLRILGSV PYNLDLVAPR ASDLAKHLRA 240
  241 RILNAGEMNI RRLRKVTFCA RSLPNMVNHI KTDSLLVTSG DRSDVIVSAC LAAMNGVKIG 300
  301 ALLLTGSYEP EPEILKLCEQ AFETGLPVFL IDTNTWQTSL NIQRFDHEVP VDDAVRIDLV 360
  361 QEYVASHIDQ TWIESVTKNS PREHRLSPPA FRYKLTELAR AAHKTVVLPE GDEPRTIKAA 420
  421 AICAERGIAR CVLLGKKDEI LRIAAQQDVV LGEGVVIVDP DEVRARYVEP MLELRRSKGL 480
  481 TEVVAKEQLE DNMVLGTMML AQDEVDGIVS GAVNTTANTI RPPLQLIKTA PGSSLVSSIF 540
  541 FMLMPDQVLV YGDCAINPDP NAEQLADIAI QSAESAKAFG IEPRVAMISY STGNSGTGSD 600
  601 VDKVREATRI AKEKRPDLVI DGPLQYDAAV MPNVARSKAP NSPVAGQATV FVFPDLNTGN 660
  661 TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAS QNDAKKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle