YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24374323, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYICPLCAL PLALTERTWG CPQSHKFDMA KEGYVNLLPV QKKNSKDPGD NQQMMFARRE  60
   61 FLNAGYYQNL SDRVNQLALQ YASSAKQILD IGCGEGYYSH RLYNALVAHH SCHLQGVDIS 120
  121 KSAIKYAAKR YQNLSFCVAS AYEIPISSNS VDLAIRIYAP SKVEELQRIM APGGILITVS 180
  181 PGPLHHFALK QQIYDQPRLH PESEARIEGF ESLHQERLRS QLVLNHSQDI SNFLEMTPYA 240
  241 WKFTAEQKQA FALGGLSCEL DFQIEVYRIS V

Type	Start	End	Confidence
Signal Peptide	1	20	0.84
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	271	0.98