YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24348744, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVKALTALC FNMMALEANA PGIWLPMIPA GTFQGVDGRS WMNPNPDGII AAFTKKRPFD  60
   61 VEHATHIKAP KGEEAPASGW ITQVENRAGE IWGFVEWNAE GRELIEEKKY AFYSPAFAHD 120
  121 PDTGVIYSLE SAGLTNSPNL NVPALNRQED DPMKLPKLLT DLLGLGEDAT AEQAVVAINA 180
  181 IKQDKEIALN SAKQVDLNLY VPTNTYQLAL NRAESAEAKL GEIAKAEIEA LVQSGVDAGK 240
  241 VAPKDKEMYL GLCSTQAGIE QFKGFLGTAP VIATNAQKKV PASKDAPELA EHELSLCRKM 300
  301 GISKEEFLAA KQQMNVGAE

Type	Start	End	Confidence
Signal Peptide	1	18	0.82
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	319	0.99