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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374068, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKPLIYFRE HYGSIIQKIT LTLFGVMGIH ASSLAQTPYS IAAHKGSQAQ PLVFAANGSS  60
   61 TPTAPQNPNT PAWLWVSEKQ GLMLQTLPTA DNTPMPAAAT LVKGEFELLA FSDPYALTLD 120
  121 RRADRIRPIM LKQIEGNVAT NVLPLLPMAS FEINWICIQP RPQDGNIYVW FGSEDGYSEQ 180
  181 WLLGDAGHFV PKKMRRQAIP VNSTSCAIDG DTLFVSEGEA GVWQFDASPF ADNSAKLILA 240
  241 SPDNDIAGMQ VINGKLLLSN KKGEITLDKQ AIANYDLGKV QGFSGYLNGT STNRAIQLAL 300
  301 YDDKTDQYLL TQAALPAALT KAGSKPSDNI IEIPAWVESA SSDRPGDTMD DPAIWVHPTQ 360
  361 PEHSLVLGTN KRWGLLSFNM RGEQVQALPS GRINNVDLRQ QVMLGGKKRD IAVATLRDND 420
  421 SLAFYEINPQ GKIVEYPNQA TDLVDIYGMC LYQDADNLYV FANEKSGRIA QYRVDWQANG 480
  481 PSIKLLRNIH TPSQVEGCVA DETQHALFIG EEDKGIWRFN AKPNADTQGE LIIKAEGDLV 540
  541 ADVEGIALYL GAQIQGQKQD LLVVSSQGNN SYILYQAKPP YAQVGRFRIG MNLNGVENGH 600
  601 ETSIDASSET DGLAVTHLSV GKGAWQQGML VVQDGHNHLP DNNQSFKWLP WSSIVEKISL 660
  661 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle