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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373997, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIKANAIQL TTLQSNLRSQ RRLSPMCIAL TVSSFFSANL VAQTVTLSSP NQHIQISLSD  60
   61 DTGRAEYKID FHGKTIIEPS RLGLVFQSIG ELGQGLRIKS SHITSTDDKW QQPWGEQEWI 120
  121 KDQHNQLSVV LTDGKIDLNL EFNAFDDGIG FRYHLAEQAA LPVDTPLSIT DELTEFNIGQ 180
  181 SNKATAWWIP SRGWNRYEYL YRTSALNQVD RAHTPFTFRL ADGTHLSIHE AALVNFASMT 240
  241 LDQQRDGKLK ADLTPWSDGI RVKTQAGFYT PWRTIQIADK ATGLLNSHLI LNLNEPNKLG 300
  301 DVSWIKPGKY VGIWWGMHLN KNTWGSGPKH GATTSETKRY MDFAAKYHFD GVLVEGWNQG 360
  361 WDGDWFHNGD QFSFTKAYDD FDLPAITAYG AKKGVRLIGH HETAGSVTHY RKQMADAFIL 420
  421 YEKHGVTQVK TGYVADGGQI KRFDENGIMR HEWHDGQFMV GEYLYNVTEA AKHHISINTH 480
  481 EPIKDTGLRR TYPNWISREG ARGQEYNAWG SPPNSPEHTA MLPFTRMLAG PMDFTPGIFD 540
  541 LAPKGLDAEN RVQTTLMKQL ALYVVLYSPI QMAADLPRNY QKHLDAFQFI RDVPTDWYQS 600
  601 IALAGEVGDY VVFARQAKDQ KDWYLGALTD ETARKVTVKL DFLDPHKRYQ AQIYRDGAKA 660
  661 DWKTNPYDYV IETKEVSAKD SLNLALASSS GTAIRFKVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle