YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24348263, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQVRHSNLL ILGSGPAGYT AAVYAARANL KPVMITGMQQ GGQLTTTTEV ENWPGDAEDL  60
   61 TGPALMERMQ KHAEKFDTEI LFDHINEVTL TERPFRLKGD NGEYTCDALI IATGASARYL 120
  121 GLESEEAFKG RGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAA EVHLIHRRDT 180
  181 FRSEKILIDR LMDKVANGNI ILHLNQTMDE VVGDAMGVTG LKMKSTKDGA ITDLAVAGVF 240
  241 VAIGHSPNTG IFEGQLEMNN GYLKVQSGLQ GNATQTSIEG VFAAGDVMDQ HYRQAITSAG 300
  301 TGCMAALDAE RYLDAKK

Type	Start	End	Confidence
Signal Peptide	1	25	0.94
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	317	0.99