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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373834, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTKRLPLAG AILASLLLGA CNGDDGVNGE QGDNGLNSLV KVTALAIGDT NCPAGGQRID  60
   61 TGLDANRNGQ LEDAEIITAQ TQFICQPQSA GVKAELIGRH QTGIYGLSAA EIVEYHSDSK 120
  121 RIFVVNAISG KVDMLDASLL ANATKASEPL ALNNLDKLGE LDVAKDVGLS FMGSVNSVSI 180
  181 SGNLLAAAIE RGDAAGNKTQ SNGFVAFYQL NGIEAPLFIS AVEVGALPDN VVFSHDGKTV 240
  241 LVANEGEPNQ DYSIDPEGSV AIIAIVDSKP SVTATLVQFT EFNQGNARNK EITHDIKING 300
  301 PIASVAQDLE PEYISISPDN SHAFVSLQEN NAIAVIDITK AKVDKILPLG LKDYGLGVNI 360
  361 IDASDKDDLV NLQAYAGVYG MYQPDTVASY RWNNTDFIVT ANEGDSRDYA GFSEEARAAD 420
  421 LTLDPNHPQF AAAKDKTQLA RLKVTKSMGN DDNDADHDKI VSFGARSFSI WTTGGQLVFD 480
  481 SGSDFERITA ALLGNNFNNN NEENKGDSRS DDKGPEPEAL TLGKIGQKRY AFIGLERTSG 540
  541 FMIYDVTNPF DVHFVDYVVN RDFDADFVID TSTGKVKGDA SLAGDLGPEG MKFVSADKSP 600
  601 NRQPLLIIGN EVSGTTSVYQ IKVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle