YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24373758, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTIAQVDGI IMKPANNHGI KRIFRATGFS MKGLKAAWIH EAAFRQELML AVVMLPVAFL  60
   61 VDISTMERLM LILTLFIVLI VELLNSAIEA VVDRVGSEIH HLSGQAKDIA SAAVFMSLAL 120
  121 CGITWLVVLL PLLV

Type	Start	End	Confidence
Cytoplasmic	1	42	0.83
Transmembrane Helix	43	63	0.77
Non-Cytoplasmic	64	68	0.58
Transmembrane Helix	69	92	0.83
Cytoplasmic	93	108	0.67
Transmembrane Helix	109	132	0.89
Non-Cytoplasmic	133	134	0.62