YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24373749, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKTLISVL VFSVFTASIA TVSARVSLQN QPLLIEPQTE WTIEQEEDDG EALIGLGGGA  60
   61 LLGALVGGPV GAVVGGITGT LIGQSVADTE LVSVTLKNPQ QHIAVQRQQV TSLTVKQLAS 120
  121 EQRAAEYAST QKHLDALLAE QQQLLSELAL GMNVQFRTGS SELEADFLPQ LDNVATVMKR 180
  181 SSESNLELKG YAERRGDWRD NQSLSEHRLL EVRDYLIQQG VAPARMTTQA LGAAMSLNEQ 240
  241 LDSESDVSDR RVTLTIPPTQ GLMASRVTE

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	269	0.97