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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373747, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKYLRHGQE RTLEGTTQAL ATALHERPKL FDGQASFLKQ VEKSRDLYAY PLAGAILLDG  60
   61 KLNEWQEYQH RFIQYGEANQ IMRADPSAPL TLSFTHMVGQ YDGYLYAFFQ VVDPNVVFRG 120
  121 KNALSVDRND HLSIATLAPD NKFKRYIVAT TQPGWISAFE LPANPKQTVP VTPEVRIQGQ 180
  181 WATTDVGYNI ELRIPLDMVG SKLGFAIADV NDSKYRDVAA VVGTSALDTV DKLGTVLVPS 240
  241 PEIENIIKGM SHYSSRIWVI DKHGRVLAKS GDIRDSNSVW TRTLDDENSN GLWQRFQRDY 300
  301 LHPLYYKILT KPPKDFIDSL RDSTELNGSH IQKALAGQQT STWRLTPDNK AVVLAAASPI 360
  361 WIDNNVMGAV VAEETTHGIR TLRNRALEKL FNVILTIMSM GTLALFFFAS SISNRIRKLR 420
  421 DEAENAIDSQ GRVRNHLKPS KARDEIGDLS RSFASIVGRL GQYTHYLENM SSRLSHELRT 480
  481 PVAVVRSSLE HLNLQTLDKD TQKYVDRAQE GVSRLSMILN NMSEATRLEQ SLTQADVTKF 540
  541 PLSQVVSGCM QGYQMTYPEQ RFSIKVPDQP LMMQGVPEYI AQLMDKLIAN AIEFCHQGSS 600
  601 IEVTLTQVGK QATLLISNLG PQLPVDMSEQ IFDSMVSVRD NQTQEKPHLG LGLYIARLVT 660
  661 EFHQGNILAR NRSENDGVDI LVTLPLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle