YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24348111, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLTAIAIT LTAIFASSYA VAAEPIEVIT PAKITEPEKV ELGKMLFFEP RLSKSGFISC  60
   61 NSCHNLSTGG VDALPTSIGH HWQEGPINSP TVLNADFMLA QFWDGRASNL KEQAAGPIAN 120
  121 PKEMGFTHEL ATETIASMPA YRARFAKVYG DEKVDIDRLT DAIAAFEKTL VTPNSPFDQY 180
  181 LLGKQDAISG DAKAGYQLFK DKGCVSCHNG PAVGGTMFMK MGLIKPFHTN NPAEGRKGVT 240
  241 GKDADKFVFK VPTLRNIELT YPYFHDGSVW TLEEAVNTMA DIQLGQKLTE KETKEMVAFL 300
  301 NSLTGEQPQI SLPILPPSNK ETPRPVPFAT GAK

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	333	0.99