YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24373672, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIDNDNPLV PYLFRVVSFL CLLGNCVSMR ALYMSHHWSK MVTFFTLNLS EKHMSYTITA  60
   61 QTRTEIGKGS SRRLRHAGKV PAVIYGAGKE PVSIVFDHKD IINAQANDDF YTSVVTIVLD 120
  121 GKEVGVRAQA MQRHAFKPII EHVDFVYA

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.82
Transmembrane Helix	12	33	0.85
Cytoplasmic	34	148	0.79