YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24373648, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQTKHFDR RFQLALLHPK YWVTWLAIGL LVIFGIMPAW LRDPIAKVLA KLVVPIAKKP  60
   61 IGIARANLSA CFPEKSAAEI ETLINNNVEN FVLVLLSQGE LLIRSKAHLR RRVNLMGFEH 120
  121 VKAAQAAGQP VIFIMPHVWP IDYAGLRLNL ELPMVTMAKA HKNGLFNWFN NRVRSSCGGH 180
  181 VYMREAGIRA LLAELKRNNS FFYLPDEDLG PDQSVFTPFL GTVKATLPVV GRLAQAGNAQ 240
  241 VLPVKIGYNQ VTRQFDLTVM SAIATEDMVG KENEALALNK AVEQVILAYP EQYMWFLRLL 300
  301 KTRPEGQASI YQ

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	41	0.96
Non-Cytoplasmic	42	312	0.93