YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24347756, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWLLLILAG LFEIGWAIGL KYTDGFTRLW PSVFTVLSMA LSVLLLGLAV KQLPIGTAYG  60
   61 VWVGIGAMGT AIAGIILLGE GVSLLKIASL ILILLGVLGL KLAH

Type	Start	End	Confidence
Cytoplasmic	1	2	0.69
Transmembrane Helix	3	20	0.71
Non-Cytoplasmic	21	28	0.62
Transmembrane Helix	29	50	0.91
Cytoplasmic	51	57	0.68
Transmembrane Helix	58	78	0.93
Non-Cytoplasmic	79	83	0.65
Transmembrane Helix	84	103	0.91
Cytoplasmic	104	104	0.84