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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373387, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKNNLLAKS VRFALIGGVA ATALNVPLVM AADEAGADKK VERIEVTGSR IKRTDMEAAS  60
   61 PVLSMNRDEI EATGMISVGD ILQTIPAAGS ALNTAFNNGG DGSTNMDLRN LGSQRLLVLV 120
  121 NGKRWISSLG STVDLNTIPT STIERIDVLK DGASAVYGSD AIAGVVNIIT RKNFEGVEVS 180
  181 VYGGQNAKYD DGRQYTADFT VGSVSEKGGL LFNMAHVTQQ PIWAGDRDIS DTGYSSTADN 240
  241 TRIRVKGSQL NQANQDALAA IGKPNSSGIY DYMSKEGTGA NVGMDQFRPR TGSDVYNFAP 300
  301 DNYLSTPQNR NSFYVQGFYD ISDNLRVVSD FMMTNRKSSQ ELAPMPLTLG ASFGAAASRV 360
  361 DIGGNNIYNP FGETLYGDSA RAVANGKPVG YVPYALQRRM VEAGSRQYNQ NDTTYRAMVG 420
  421 LEGNINDNWS WTASYIYGQN NQDVLTTGLL NLTRINQALG DNCNASNGCV ALNLFGGPGS 480
  481 VTQDMVDYIT FDSVSRSGLT MKDYTFNIAG DLFDLPAGPV GLAFGLERRE ESGFDTPDPL 540
  541 TVTGESSGNQ RDATSGGFRL DEAYAELAIP VIESLLITPA VRVSDHDAYG NNTTGKVGAE 600
  601 FRPMDDMLLR GTWAQGYRAP SISDLYAGSA DSYPTWNDPC NTRDSKGNVL NISGLPGCAG 660
  661 VPDGYRQANT QIRISQVSSP DLKPETSESY TFGTVYNPSW LEGAEFTVDY YNIKVEDAIG 720
  721 RYGHTTIARE CATGDKVSSC DKIDRDSLGN IVDLRNFLQN AGTYEVEGID FFTAYRFPET 780
  781 SFGSFKTSLD LAYVLGNEFD GEDRAGIQYG DGGFPELKGS LNIDWAMGDW DAHWKMRYVG 840
  841 ELTSDFYAND PANYDFYKDN GYRETFSAYM VHNVSVGYNI EDYNTKVSLG INNLFATEPQ 900
  901 AEGPTNNEAL SSNNFSVTEY DVNMDRFIYL RATTKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle