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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24372995, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFFTRLMF ILALFIDFNL PVIAADSHAN DPVRIGIMAF NEPDEVMANW QPTADWLSQQ  60
   61 LHRPVQLMPL TPSQLDEALV KQSIDFLIGN ALTTVAFKRN YGTSHLLTLV HNRVRSPEQS 120
  121 IGSAIVARID SNLSQWDQLK DEKLVSSDPQ AFGGFQIFAA TMATKGINAY RDIPKLRFIG 180
  181 FPQQKLLQMV LSGEADIAVL PSCVLENALD KGLVPANKLK VVLKQPHPDF ACEVSTQLYP 240
  241 GYALTKLGHT DHKLATQVVA SLLQITPDTP AAQQGRYQYW SAPVDDSPVF ELLKQLEQWP 300
  301 FVTNWQRLLH NALPWGTSLI FVLLLGYIHH LRVKRLVVKR TQALSDEITH HQHTQKILLE 360
  361 QQQQFYRAQR VLLTGEMASG IAHELKQPLA GIRYLTQGCL YRLDNTQAEL ATALNKVISQ 420
  421 VDRAQTTIHR LRTFCQQTSD YQSCDLRTVI EETLTLMQPE FQRLKLSPKV NLQALPVFAD 480
  481 ASLMQQVLVN LLRNALDAME SIPQKSLFID TGITGENVYI HITDAGCGLS DSALKRLFFP 540
  541 FETSKPQGLG LGMVICKRII EEHKGKIEAH HANPGLTIKV TLPVNSQPGL GEQNDTALPR 600
  601 G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle