YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24346989, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLFQCPTC GLALMQHQAS QGFYCANKHH FDKNAAGYWV FTKPARQKPT GDSRQQVRAK  60
   61 HFLLESGVFT PLIDKIGEMI AAHLQPNDCL LDYECAEGFY LRALSSTLSK LTNGINVQYT 120
  121 GVADAENTIF AAAKAQTPAA LCLTTSKVLP FADNCLDFIT VVDRPLKGKE CVRILKEQGF 180
  181 MLQVIPGARH LWQIKALIYP ELAEKSVQVN LPSGLTVKEQ QRLQFSLSVT GEQALVLLDM 240
  241 TPYAWRASDK VKHLIRSQAF DKLEIDFTLV LAQKL

Type	Start	End	Confidence
Signal Peptide	1	22	0.87
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	275	0.99