YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24346947, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYPLVSTQW LEEQLTSPEL VLLDASMAVV LGKEPILYHE PICIPRSRRF DVEEDFCDKT  60
   61 STQIHALPRF ESFVEGIAKL GIEPQSLIVI YDNQGIYSSP RAWWIFKVMG FHRVYVLDGG 120
  121 LPQWIAEDRV TSSRYQEEGI DYGVTDSAPL AAVLQYQSAK VMDAEAVLAR LDDSESAIID 180
  181 ARGATRFLGQ VSEPRPGVRS GHIPHSVNLP FGEVLNGYKM KSTTELQAIF QALVGNKALR 240
  241 IFSCGSGITA CILILASVVA GHKSAVLYDG SWADWGSRTD LPIER

Type	Start	End	Confidence
Cytoplasmic	1	240	0.74
Transmembrane Helix	241	262	0.74
Non-Cytoplasmic	263	285	0.88