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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346905, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLSLSRRS LTGRLMLAFS VLGLLLLLLV SLGSLSLHWL KQADRYLYEE SLPASQAARQ  60
   61 LVQASNALSD GVTQLGQVED ERQREFIGRK LNLESATMLN SIKVLLALDV NEDNHLPVLA 120
  121 GQIIEQLTLL GQSVGQRITL GDELQRRARE LSVAAAHASE LLQSELAVVD SAILAKLSQA 180
  181 YPDMAGNKRS GQLLDDVIER ELDIQEQLNR ALKLVHQIAL LSQLFEVSEL QSELQLSVPR 240
  241 LLATFASTLP SHPVAHINQQ KGTAIEQASE AVTELSAPEV GIDLMALTTV SELIRDPGRL 300
  301 NALKAELVTL KHTPKIIKLQ RDLSQSLQRQ QRQQQALAEK LYSLNTLVDS ALNQQQQRAE 360
  361 LARSDYLMQL SYARFGLLAT GMLMFVIMGW VIYRVIYRGI ALRLNQATQA MSRLSLGDIN 420
  421 VSLDARGDDE LTAMANAIEA FKRKTAHNLK LQADLRQVAD ELTEHKKALE QTVATRTQEL 480
  481 AETNLRLDAE AKGHAKARVV AEEASQAKSQ FLATMSHEIR TPLNGLLGTL TLLGQSQLPP 540
  541 AQQQMLALSQ YSGTLLQTVL SDILDFSRLE QGNLTNEPRP TDINALLDEV LAIMVAGANL 600
  601 AGLSLRLNRP QLPACINIDG PKLRQVLFNL IGNGIKFTSE GSVSLNVSLQ GGRLAFVVAD 660
  661 TGVGIAPEVR EQLFIPYSTL PNQGRSRGTG LGLAICKQLV ELMDANGRGI WVKSEPGKGS 720
  721 EFGFELCFTQ CDKAQDAQTL VHKQVHTQRV LVVEDNKVNA MVAQGFLAHL GHSSTLAASC 780
  781 QLALECVSAD KAFDAVMLDI QLSDGSGVAL LPQLKALFGA KNVKFAAFTA QMQMEDLSLY 840
  841 REVGFDTVLA KPLSLQTLTQ WLGVAMASSS LETESPGLSA SPSFISASSA PLAQATDTSG 900
  901 AIPLGNQATE TLLDIEQLQQ DIEVLGVKAV SDMLALYKTS SAEQIERLSE ATFVESSADS 960
  961 AKLLHALKGS SASMGLKALT QCCQVWEKQL KTTGAQKLEI QSANELRACW LASMTALEQW1020
 1021 LVTVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle