YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SO1183
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTQQSASI TSETQSFDVI LVGGGMVGAA TAIGLAQQGL HIAVIESFAP EAYSPEQALD  60
   61 VRVSAISVAS EHLLEQLGAL DSLLKMRNVP YLGLETWELD GCITQFHSSQ IGASHLGHIV 120
  121 ENRLVQLALW EQMQQWENIR LFCPERVAHF ARGVDTVSVH LQSGCLLEAK LLVGADGANS 180
  181 HVRQWAGIGI SGWDYAQSAM LINIQTTQGQ QDVTWQQFTP SGPRSLLPLP GNHASLVWYD 240
  241 DANRIKQLMQ LNNKQLAEQI RQHFPARLDS DFIVEAKGSF ALTRRHAQVY VKPNVVILGD 300
  301 AAHTINPLAG QGVNLGFKDV EALLSVIKAA LTEDKPWWST EVLGKYQAKR YLDNQLMMTT 360
  361 MDVFYAGFSN DILPLKLLRN GALKLANINS PLKQTVLKYA MGLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle