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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346822, gi|...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPKKRITMH DHAAEASLFK RRALFTFFCV VALLSMLVTN LYHLQVESYK DYATRSNDNR  60
   61 IRVVPIAPSR GLIYDRNGVL LAENQPFYSL DLVPEKIANM SETLDELGKL IEISPDEREN 120
  121 FTEALKFHRR FKPLTLKNQL TEEQVAIFSV NQHRFPGITV EAGLKRNYPY VSQLTHVLGY 180
  181 VGKINTRDRA QLERNDQWKN YAATKDIGKQ GIEKFYESLL HGTPGHLEEE VNNRGRTIRT 240
  241 LKIVPPEPGQ DIYLTLDLQL QQKAVELLQG HKGSIVAIDP RDGGILALVS SPSYDPNQFV 300
  301 QGINRKDYSD LLNDKSRPLI NRATQGQYAP ASTVKPIIAL LGLDEKAVTE HTRIWDPGFW 360
  361 QIPGVERKYR DWKRWGHGWV NVYSAIVESC DTYFYELAYK IGVDPIARFM EQFGFGQNTG 420
  421 VDIFEESTGN MPSKEWKRLK YNQAWYIGDT ISVGIGQGYW TATPLQLASA TAILANNGRR 480
  481 FPPHLLKSIK DNTAKIDSPI NELPPIELKN PRNWKIINEA MRQTAHKSRF TDASYTAAMK 540
  541 TGTAQVIGVA ENTKYDANKI AEHFRDNALV VAYAPFENPK IVLAVVMENA GWGGANAGPV 600
  601 ARAMLDEYML RDTWKPTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle