YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24372693, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKTLALKTS MFKHSVSWLV LVGLAFFISA CSKQDEVISL AGSTMGTTYH IKVVPNEHMP  60
   61 TAQLLQAEID LALEQVNNQM STYRPNSELS RFNQLPLEQS VEVSPDTIKV VREGMRLYDV 120
  121 TDKALDITLG PLVNLWGFGP DKRPTKVPSQ AEIDAAKAKT GIRELSIEGN LLRKHNAHLY 180
  181 VDLSSIAKGF GVDKVASILD KYQATGYLVE IGGELSIKGT KGDASSWRVA IEKPTDEGIA 240
  241 VQQVIEPGTM SMATSGDYRN YYEEAGQRFT HIIDPRTGLP INHKLASVTV LHNECMTADG 300
  301 FATAMMVLGT EASLELAKKE HLAIMLIEKQ GEGFKVYYSD AFKPFLK

Type	Start	End	Confidence
Signal Peptide	1	32	0.98
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	347	0.99