YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24346723, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRAKPLLG TLIEIAVESV VEASSQSALD EPAIQAAITA AFSRITQIGR LLSFHQQDSE  60
   61 LNLLNRQPGQ WITLSQDSLR VFKLAKWFGK ASDNLFNCTI GGEMMSRGAL PCYLGMPLLL 120
  121 QGDWQDIEIR GNQARLARPL IVTFDGIAKG YAVDMAVREL RRAGVSGGWV NAGGDLKVFG 180
  181 SASLDVLCRG SNGLSQKVTV RNMALASSRV SLQLSLGCPA LLLPTGNVDM MSFDASNERV 240
  241 VSVQAPFAWR ADALTKVAGY LSAEAAKDKI QQLGGQLVC

Type	Start	End	Confidence
Signal Peptide	1	23	0.88
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	279	0.99