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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346505, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFNKLMIAM GMACGVMLTG CNDSEDSTPP TEPETKLQTF APNGLLKANI RRTTYGVPHI  60
   61 QADNLESLGF GSGYAQAQDN LCVLADGFIK ANSQRSMYFG PHASIDFTTG QPTAEDNGNL 120
  121 ISDFAYKALK IRQQAEAKWP QFSERSRALI QGFTAGYNQY LADVEAGKQT AEPFCGGQPW 180
  181 VKPIVPEDVV TYLFSIALLP GAANFLDLIF YANPGDGQEY MPRIVGPAPS QEQTAFVSDM 240
  241 QSKLIARAAR ITTPETNPRD LGSNGWGLGK DKTENGRGMV LGNPHFPHTG NLRFWQSHIT 300
  301 IPGHLDMMGG SLVGMPGPIN IGFNKDLAWT HTFSTAEHFV MYNLELVSGD RLQYLFDGKP 360
  361 MPINKETVSI IVNAGPAGMV VAEKDIYTTA KGPMVEAPPT LAPFGWDDGS AFMLQDANMA 420
  421 TMDPVDHWLA MNLATNKDEF QQAFKDYDGV IFNNTMYADK EGNAFYIDDS TVPGLSESAV 480
  481 VLLKTSPDIK AAKQKAGFTI LPGNTSLFSF SGPNPYERAP KLERSDFVQN SNDSFWSTNL 540
  541 NEPLTYFSPM YGQEAGQLSL RTRMGLTLMQ DAAGTDGKFN LQELEAAVLS NRSYLAELVL 600
  601 PALIAQCEAQ GSTPVVVSAS LSKDLTSACA ALKAWNGKQD NDSKGGALLR EFAHLFNQKT 660
  661 MLTKGFDPAN AATTPNTLAT DGSVLVALAQ AALNLESAGF ALDAPLGEVQ FVEKSLPDGT 720
  721 ASGVRLPWPG THNAEGGFNV FSTSLSGDDT LIPQHKYAPL KDVVTGKAMG SGMTAKGYQI 780
  781 RYGSSWMMAV SFTDEGPVAR GILTYSQSSN ILSPSFTDQS DLYSSSKSFR PLLFKEADIA 840
  841 PAVVSTTELM LQKAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle