YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24346456, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKHPIIAV TGSSGAGTTT TTTAFSHIFR QLGINAAFVE GDSFHHYTRA EMEVMIRKSQ  60
   61 AENRNLSYFG PEANNFARLE QCFRDYGATG QGETRSYLHT FDEAVPFNQM PGTFTQWRPL 120
  121 PENTDMLYYE GLHGGVVTGD ANVAQHVDLL IGMVPIVNLE WIQKIIRDTS ERGHSREKVM 180
  181 GSIVRSMDDY IKHMTPQFSR THINFQRVPT VDTSNPFSAK DIPSLDESFV VIRFRGINNV 240
  241 DFPYYLSMIQ GSFMSRVNTL VVPGGKMSLA MELILTPLIK DLMEKRQQLN SPQAN

Type	Start	End	Confidence
Signal Peptide	1	26	0.83
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	295	0.99