YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24372442, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRPSIEGFT LVELMVVIAI IGILASLALP SYRDLIAKES LISTANELIS SYKFARGEAI  60
   61 KRNQAVTLEA KQDGRWLIIS NQEELKVFSP SSRGISIDGF NTLDINATGN TTKTQISLEN 120
  121 TQGEKLNLCI LPSGQSFLQE EACA

Type	Start	End	Confidence
Cytoplasmic	1	8	0.59
Transmembrane Helix	9	30	0.85
Non-Cytoplasmic	31	144	0.68