YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24372426, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLALSAVL VVASIVGMPA MANEWQEKPS WNTHFSEHKA QGVIVLWNEN KQQGFTNNLK  60
   61 RANQAFLPAS TFKIPNSLIA LDLGVVKDEH QVFKWDGQTR DIAAWNRDHD LITAMKYSVV 120
  121 PVYQEFARQI GQARMSKMLH AFDYGNEDIS GNLDSFWLDG GIRISATEQV AFLRKLYHNK 180
  181 LHVSERSQRI VKQAMLTEAN SDYIIRAKTG YSTRIEPQIG WWVGWVELDD NVWFFAMNMD 240
  241 MPTADGLGLR QAITKEVLKQ EKIIP

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	265	0.99