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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24372395, gi|...
Protein type: Transmembrane
Type Confidence: 0.42
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTVTRRDF LAISAKGIGA AVISYGLMGC SNSDDDNSVP AQFLHGIASG DPMQDAVILW  60
   61 TRVTPDSAGD VKVSWQVASD AAFSQLVTTG EMVTNANRDY TVKVDARGLR AGQNYFYRFM 120
  121 TGDKTSVVGK TRTLPEGEVS SVKLAVMSCA NFPAGYFNVY ELAAAQNDLD AVVHLGDYIY 180
  181 EYARGGYASE NAAKLGREVL PANELLSLSD YRTRYGQYRS DSSLQKLHAK VPFITVWDDH 240
  241 EVANDTWRDG AENHNEGEGI FAARKEAALQ AYFEWLPIRP WREGNHEEIY RSFSYGNLVD 300
  301 LHMLDTRVLA RDKQLDYADY MDATTGAFDG ERFRADVTST SRTLLGLTQL LWLQGTLLQA 360
  361 TGTWQVLGQQ ILMGKMSLPA AIATQQMSIP QFAMLGALAK LAARAAANDP TLTAQELQYL 420
  421 QANQALLTPE VIALLQLPAI PYNLDAWDGY AYEREVILGT AKSKNHNLVV IAGDTHNAWA 480
  481 NELKDVNGNT VGVEFATSSV SSPGLEYYLN LPAEQIPATE AAIVDLVPDL QYTNLKDRGF 540
  541 MTLTFTKDAV RSDWHYVSTI LTKEFEEASS RRFSAITKVG KPSINPVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle