YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24372201, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLIALVT LLPTLAIAAG GQVHLEDANV DLHDKASLER GLGLFQHYCS GCHSTQYQRY  60
   61 ERVANDLGIS ADDMRNKYMF TDAKIGELMQ NAIPPKDAAK WFGATPPDLT LVARVRGEDW 120
  121 VYSYLKGFYK DPSRPFGVNN TVFPSVGMPH VLEELQGTPV KQEDGTIVVS GGKLNAEEYD 180
  181 QAVRDITGFL VYSAEPVKLE RQALGWWVLG FLFIFFIVAY LLKKEYWKDV H

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	202	0.99
Transmembrane Helix	203	222	0.97
Cytoplasmic	223	231	0.94