YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24372199, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG  60
   61 QLIRVEWRGK PVWVVRRTEA VINELPTHDA QLRDPASAEM QQPEYATNPL RSIKPEYFIA 120
  121 VGICTHLGCS PTYLPDSFAE QVQGVTSGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHQ 180
  181 YVDDGTVIIG VDKGVA

Type	Start	End	Confidence
Signal Peptide	1	28	0.69
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	196	0.92