YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24372076, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGFTIAL LLSGFVAWIF WQHARLNQLQ TVARLPLVSH WLPVLCSGVL LAMTLAIYSQ  60
   61 TGRYSDWDKG KLDEHIDYLV AADITKALRL VDAEPKNPLA LMSLAQAYSA GGKYGDAVQT 120
  121 LDKLLALTPE DAEVLGAKAN ALYYRDRRQM TPETLEVIAK ALVLSPFEPQ TKMLLATDAY 180
  181 LHTRYQEAID HWQSLLTQAS GRVNRDAINN AIQKAQIKLN ESGY

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.44
Transmembrane Helix	5	24	0.82
Cytoplasmic	25	36	0.42
Transmembrane Helix	37	58	0.82
Non-Cytoplasmic	59	224	0.56