YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UBIA_SHEON
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	19	0.96
Transmembrane Helix	20	39	0.95
Non-Cytoplasmic	40	45	0.81
Transmembrane Helix	46	67	0.91
Cytoplasmic	68	87	0.92
Transmembrane Helix	88	108	0.90
Non-Cytoplasmic	109	113	0.65
Transmembrane Helix	114	132	0.88
Cytoplasmic	133	140	0.75
Transmembrane Helix	141	159	0.84
Non-Cytoplasmic	160	165	0.75
Transmembrane Helix	166	187	0.80
Cytoplasmic	188	206	0.94
Transmembrane Helix	207	228	0.87
Non-Cytoplasmic	229	233	0.79
Transmembrane Helix	234	255	0.89
Cytoplasmic	256	264	0.87
Transmembrane Helix	265	285	0.79
Non-Cytoplasmic	286	286	0.88

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKHKWDVY SRLTRLDRPI GTLLLLWPCL MALVLAAGGM PDLKVLIIFI IGVVIMRACG  60
   61 CIINDYADRD LDSHVERTKS RPLASGEIST KEALLLFVIL GLAAFGLVLL LNGLVVKLSV 120
  121 VGIILTIIYP FTKRVTNMPQ MFLGVVWSWS IPMAYAAQTG EVPIEAWWLF AANWFWTVAY 180
  181 DTMYAMVDRD DDLKIGIKST AILFGKYDRQ IIGLFQIAAL FCFVAAGWSA DRGLVYGLGL 240
  241 LTFVGFSTYQ QMLIFGRERA PCFKAFLNNN WAGLVLFVSL GADYLF